Stem-loop prd-lin-4

Accession

MI0025549

Description

Panagrellus redivivus prd-lin-4 precursor miRNA

Sequence

UCCCUGAGACUAUAGCUGUGacggccaaguugaaacucACGGACUAUAGUGUCGGGAAUG
..(((((.(((((((((((((((((...))))....)))))).))))))).)))))....

Structure

--UC     G       -      ----    c 
    CCUGA ACUAUAG CUGUGa    cggc  
    ||||| ||||||| ||||||    |||| a
    GGGCU UGAUAUC GGCAcu    guug  
GUAA     G       A      caaa    a 

Annotation confidence Not enough data

Genome context

KB455497.1: 10809-10868 [-]

Mature prd-lin-4-5p

• Accession: MIMAT0030456
• Description: Panagrellus redivivus prd-lin-4-5p mature miRNA
• Sequence: 1 - UCCCUGAGACUAUAGCUGUG - 20
• Evidence: experimental ; Illumina [1]

Mature prd-lin-4-3p

• Accession: MIMAT0030457
• Description: Panagrellus redivivus prd-lin-4-3p mature miRNA
• Sequence: 39 - ACGGACUAUAGUGUCGGGAAUG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295