Stem-loop prd-mir-71

Accession

MI0025551

Description

Panagrellus redivivus prd-mir-71 precursor miRNA

Sequence

UGAAAGACAUGGGUAGUGAGACgugugcucugcgaucgUGUCACUAUUCUGUUUUUCGCC
.((((((((.(((((((((.(((..(((...)))..))).)))))))))))))))))...

Structure

--U        U         G   ug   u 
   GAAAGACA GGGUAGUGA ACg  ugc  
   |||||||| ||||||||| |||  ||| c
   CUUUUUGU CUUAUCACU Ugc  gcg  
CCG        -         G   ua   u 

Annotation confidence Not enough data

Genome context

KB455565.1: 273844-273903 [-]

Mature prd-miR-71-5p

• Accession: MIMAT0030460
• Description: Panagrellus redivivus prd-miR-71-5p mature miRNA
• Sequence: 1 - UGAAAGACAUGGGUAGUGAGAC - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-71-3p

• Accession: MIMAT0030461
• Description: Panagrellus redivivus prd-miR-71-3p mature miRNA
• Sequence: 39 - UGUCACUAUUCUGUUUUUCGCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295