Stem-loop prd-mir-72

Accession

MI0025560

Description

Panagrellus redivivus prd-mir-72 precursor miRNA

Sequence

AGGCAAGAUGUUGGCAUAGCUGagucccauucaauauuuguaucucaGCCAUGCUACAUAGGGCCAUG
.(((...((((.(((((.((((((...((.........))...)))))).)))))))))...)))...

Structure

--A   AAG    U     A      ucc  uuc 
   GGC   AUGU GGCAU GCUGag   ca   a
   |||   |||| ||||| ||||||   ||   a
   CCG   UACA UCGUA CGacuc   gu   u
GUA   GGA    -     C      uau  uua 

Annotation confidence Not enough data

Genome context

KB455323.1: 49053-49120 [+]

Mature prd-miR-72-5p

• Accession: MIMAT0030478
• Description: Panagrellus redivivus prd-miR-72-5p mature miRNA
• Sequence: 1 - AGGCAAGAUGUUGGCAUAGCUG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-72-3p

• Accession: MIMAT0030479
• Description: Panagrellus redivivus prd-miR-72-3p mature miRNA
• Sequence: 48 - GCCAUGCUACAUAGGGCCAUG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295