Stem-loop prd-mir-50

Accession

MI0025562

Description

Panagrellus redivivus prd-mir-50 precursor miRNA

Sequence

UGAUAUGUCUGGUAUUCUUGGGUUgugccagaaugagaucaaCCGGCGUGCUAGGCAUAUCCU
.((((((((((((((...(.(((((..(((...)).)..))))).).))))))))))))))..

Structure

-U              UCU G     ug -  g 
  GAUAUGUCUGGUAU   U GGUUg  c ca  
  ||||||||||||||   | |||||  | || a
  CUAUACGGAUCGUG   G CCaac  g gu  
UC              --C G     ua a  a 

Annotation confidence Not enough data

Genome context

KB455345.1: 160203-160265 [-]

Mature prd-miR-50-5p

• Accession: MIMAT0030482
• Description: Panagrellus redivivus prd-miR-50-5p mature miRNA
• Sequence: 1 - UGAUAUGUCUGGUAUUCUUGGGUU - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-50-3p

• Accession: MIMAT0030483
• Description: Panagrellus redivivus prd-miR-50-3p mature miRNA
• Sequence: 43 - CCGGCGUGCUAGGCAUAUCCU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295