Stem-loop prd-mir-7871

Accession

MI0025564

Description

Panagrellus redivivus prd-mir-7871 precursor miRNA

Sequence

UGAAGGUUAGCCAAUGGUUGgccauauacauuacauugGCACGUUGGUUCAACUUUCGA
((((((((((((((((....((((............)))).)))))))).)))))))).

Structure

-        -        GUUG    uauac 
 UGAAGGUU AGCCAAUG    gcca     a
 |||||||| ||||||||    ||||      
 GCUUUCAA UUGGUUGC    CGgu     u
A        C        ---A    uacau 

Annotation confidence Not enough data

Genome context

KB455326.1: 126719-126777 [-]

Mature prd-miR-7871-5p

• Accession: MIMAT0030486
• Description: Panagrellus redivivus prd-miR-7871-5p mature miRNA
• Sequence: 1 - UGAAGGUUAGCCAAUGGUUG - 20
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7871-3p

• Accession: MIMAT0030487
• Description: Panagrellus redivivus prd-miR-7871-3p mature miRNA
• Sequence: 39 - GCACGUUGGUUCAACUUUCGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295