Stem-loop prd-mir-7872

Accession

MI0025565

Description

Panagrellus redivivus prd-mir-7872 precursor miRNA

Sequence

AUUAAAUCAAAAGCGGUAUUUGCGuugauugauggugaauucgCAAGUACGUUUUUGAUUUGAGC
.((((((((((((((.((((((((..((((.......))))))))))))))))))))))))))..

Structure

-A              G        uu    ga 
  UUAAAUCAAAAGCG UAUUUGCG  gauu  u
  |||||||||||||| ||||||||  ||||  g
  AGUUUAGUUUUUGC AUGAACgc  uuaa  g
CG              -        --    gu 

Annotation confidence Not enough data

Genome context

KB455106.1: 43788-43852 [-]

Mature prd-miR-7872-5p

• Accession: MIMAT0030488
• Description: Panagrellus redivivus prd-miR-7872-5p mature miRNA
• Sequence: 1 - AUUAAAUCAAAAGCGGUAUUUGCG - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7872-3p

• Accession: MIMAT0030489
• Description: Panagrellus redivivus prd-miR-7872-3p mature miRNA
• Sequence: 44 - CAAGUACGUUUUUGAUUUGAGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295