Stem-loop prd-mir-7876

Accession

MI0025573

Description

Panagrellus redivivus prd-mir-7876 precursor miRNA

Sequence

2468 reads, 3461.0 reads per million, 1 experiments

AAUGCAUUCUUUGGGCUGCCUCCGUuaauauugaucaucgGUGGCACUCUUAGAAUGCAUGGC
.(((((((((..(((.((((.(((..............))).)))))))..)))))))))...

Structure

--A         UU   C    U   Uuaaua 
   AUGCAUUCU  GGG UGCC CCG      u
   |||||||||  ||| |||| |||       
   UACGUAAGA  CUC ACGG Ggc      u
CGG         UU   -    U   uacuag 

Annotation confidence High

Genome context

KB455460.1: 2157464-2157526 [+]

Mature prd-miR-7876-5p

• Accession: MIMAT0030504
• Description: Panagrellus redivivus prd-miR-7876-5p mature miRNA
• Sequence: 1 - AAUGCAUUCUUUGGGCUGCCUCCGU - 25
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7876-3p

• Accession: MIMAT0030505
• Description: Panagrellus redivivus prd-miR-7876-3p mature miRNA
• Sequence: 41 - GUGGCACUCUUAGAAUGCAUGGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295