Stem-loop prd-mir-7877

Accession

MI0025574

Description

Panagrellus redivivus prd-mir-7877 precursor miRNA

Sequence

CGGUUGAUUUUGGAUGGUAGACUuagagauaucuaugugcuagUUACCAUGUAAAUCAACCCAUC
.(((((((((.(.(((((((((.((((....)))).)).....))))))).))))))))))....

Structure

---C         U G       -----  U    g 
    GGUUGAUUU G AUGGUAG     AC uaga a
    ||||||||| | |||||||     || ||||  
    CCAACUAAA U UACCAUU     ug aucu u
CUAC         - G       gaucg  u    a 

Annotation confidence Not enough data

Genome context

KB455547.1: 652587-652651 [-]

Mature prd-miR-7877-5p

• Accession: MIMAT0030506
• Description: Panagrellus redivivus prd-miR-7877-5p mature miRNA
• Sequence: 1 - CGGUUGAUUUUGGAUGGUAGACU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7877-3p

• Accession: MIMAT0030507
• Description: Panagrellus redivivus prd-miR-7877-3p mature miRNA
• Sequence: 44 - UUACCAUGUAAAUCAACCCAUC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295