Stem-loop prd-mir-7878

Accession

MI0025577

Description

Panagrellus redivivus prd-mir-7878 precursor miRNA

Sequence

UGAAGGUGGCUCCAGAUCGUUGaauguugaauccaACGGUCUGUAGCUACCUUCACC
(((((((((((.((((((((((.((.....)).)))))))))).)))))))))))..

Structure

--           C          a  g 
  UGAAGGUGGCU CAGAUCGUUG au u
  ||||||||||| |||||||||| || u
  ACUUCCAUCGA GUCUGGCAac ua g
CC           U          c  a 

Annotation confidence Not enough data

Genome context

KB454987.1: 1792-1848 [-]

Mature prd-miR-7878-5p

• Accession: MIMAT0030512
• Description: Panagrellus redivivus prd-miR-7878-5p mature miRNA
• Sequence: 1 - UGAAGGUGGCUCCAGAUCGUUG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7878-3p

• Accession: MIMAT0030513
• Description: Panagrellus redivivus prd-miR-7878-3p mature miRNA
• Sequence: 36 - ACGGUCUGUAGCUACCUUCACC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295