Stem-loop prd-mir-242

Accession

MI0025579

Description

Panagrellus redivivus prd-mir-242 precursor miRNA

Sequence

UUGCGUAGGCACUUUGUCACCGauggcguauggcauucucGAUGCAAAGAGCUAUGCAACC
((((((((.(.(((((.((.(((..((.....))....))).))))))).)))))))))..

Structure

--        G A     U  C   --ug  g 
  UUGCGUAG C CUUUG CA CGa    gc u
  |||||||| | ||||| || |||    || a
  AACGUAUC G GAAAC GU Gcu    cg u
CC        - A     -  A   cuua  g 

Annotation confidence Not enough data

Genome context

KB455494.1: 95862-95922 [+]

Mature prd-miR-242-5p

• Accession: MIMAT0030516
• Description: Panagrellus redivivus prd-miR-242-5p mature miRNA
• Sequence: 1 - UUGCGUAGGCACUUUGUCACCG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-242-3p

• Accession: MIMAT0030517
• Description: Panagrellus redivivus prd-miR-242-3p mature miRNA
• Sequence: 41 - GAUGCAAAGAGCUAUGCAACC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295