Stem-loop prd-mir-7880a

Accession

MI0025580

Description

Panagrellus redivivus prd-mir-7880a precursor miRNA

Sequence

UGACCUGGAAUGGUGUGUAACAGCaaucccuuauuuagcUUUGCGACCGUAUCCAGGCCA
...(((((((((((.(((((.(((((........)).))))))))))))).))))))...

Structure

UGA      -     G     C   -  ucc 
   CCUGGA AUGGU UGUAA AGC aa   c
   |||||| ||||| ||||| ||| ||    
   GGACCU UGCCA GCGUU Ucg uu   u
ACC      A     -     -   a  uau 

Annotation confidence Not enough data

Genome context

KB454964.1: 33315-33374 [+]

Mature prd-miR-7880a-5p

• Accession: MIMAT0030518
• Description: Panagrellus redivivus prd-miR-7880a-5p mature miRNA
• Sequence: 1 - UGACCUGGAAUGGUGUGUAACAGC - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7880a-3p

• Accession: MIMAT0030519
• Description: Panagrellus redivivus prd-miR-7880a-3p mature miRNA
• Sequence: 40 - UUUGCGACCGUAUCCAGGCCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295