Stem-loop prd-mir-252

Accession

MI0025583

Description

Panagrellus redivivus prd-mir-252 precursor miRNA

Sequence

CUAAGUAGUAGUGCCGCAGGUAaugguaauaacaugucuuaCCUGAUCAUUGCUGCUUAAAA
.((((((((((((...(((((((.((((......)))))))))))..))))))))))))...

Structure

--C            CCG       u    au 
   UAAGUAGUAGUG   CAGGUAa ggua  a
   ||||||||||||   ||||||| ||||   
   AUUCGUCGUUAC   GUCCauu cugu  a
AAA            -UA       -    ac 

Annotation confidence Low

Genome context

KB455337.1: 78493-78554 [-]

Mature prd-miR-252-5p

• Accession: MIMAT0030524
• Description: Panagrellus redivivus prd-miR-252-5p mature miRNA
• Sequence: 1 - CUAAGUAGUAGUGCCGCAGGUA - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-252-3p

• Accession: MIMAT0030525
• Description: Panagrellus redivivus prd-miR-252-3p mature miRNA
• Sequence: 42 - CCUGAUCAUUGCUGCUUAAAA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295