miRBase entry: prd-mir-7883a

Accession

MI0025584

Description

Panagrellus redivivus prd-mir-7883a precursor miRNA

Sequence

AUUUGAGUCCACGAUGCACCUUGuaacgguaauucaAGGUACACCGUGAACUCAAAU
((((((((.((((.((.((((((...........)))))).)).)))).))))))))

Structure

        C    A  C      uaac 
AUUUGAGU CACG UG ACCUUG    g
|||||||| |||| || ||||||    g
UAAACUCA GUGC AC UGGAac    u
        A    C  A      uuaa

Annotation confidence Not enough data

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Genome context

KB455460.1: 1965687-1965743 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7883a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0030526
Description	Panagrellus redivivus prd-miR-7883a-5p mature miRNA
Sequence	1 - AUUUGAGUCCACGAUGCACCUUG - 23
Evidence	experimental Illumina [1]

Accession	MIMAT0030527
Description	Panagrellus redivivus prd-miR-7883a-3p mature miRNA
Sequence	37 - AGGUACACCGUGAACUCAAAU - 57
Evidence	experimental Illumina [1]

PubMed ID: 23410827
The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
"Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
"Genetics (2013) 193:1279-1295