Stem-loop prd-mir-36

Accession

MI0025586

Description

Panagrellus redivivus prd-mir-36 precursor miRNA

Sequence

AACGGCUGUUUGCCACAGUGAGCgaugauuaucauagcCCACCGGGUAGACAGUUGUUC
((((((((((((((.(.(((.((.((((...)))).)).))).))))))))))))))).

Structure

-              A A   A  g    u 
 AACGGCUGUUUGCC C GUG GC auga  
 |||||||||||||| | ||| || |||| u
 UUGUUGACAGAUGG G CAC cg uacu  
C              - C   C  a    a 

Annotation confidence Not enough data

Genome context

KB455309.1: 33119-33177 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from prd-mir-36

Mature prd-miR-36-5p

• Accession: MIMAT0030530
• Description: Panagrellus redivivus prd-miR-36-5p mature miRNA
• Sequence: 1 - AACGGCUGUUUGCCACAGUGAGC - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-36-3p

• Accession: MIMAT0030531
• Description: Panagrellus redivivus prd-miR-36-3p mature miRNA
• Sequence: 39 - CCACCGGGUAGACAGUUGUUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295