Stem-loop prd-mir-7884

Accession

MI0025587

Description

Panagrellus redivivus prd-mir-7884 precursor miRNA

Sequence

CGUAGGUGCUGAGCGUCAUUUUcauuucuuuuugcaAAUGGCGUCUCAAGGACCUUGCGA
(((((((.(((((((((((((.((........)).)))))))).))).)).))).)))).

Structure

-    -   G  -   -        U  uuu 
 CGUA GGU CU GAG CGUCAUUU ca   c
 |||| ||| || ||| |||||||| ||    
 GCGU CCA GA CUC GCGGUAAa gu   u
A    U   G  A   U        c  uuu 

Annotation confidence Not enough data

Genome context

KB455127.1: 278074-278133 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from prd-mir-7884

Mature prd-miR-7884-5p

• Accession: MIMAT0030532
• Description: Panagrellus redivivus prd-miR-7884-5p mature miRNA
• Sequence: 1 - CGUAGGUGCUGAGCGUCAUUUU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7884-3p

• Accession: MIMAT0030533
• Description: Panagrellus redivivus prd-miR-7884-3p mature miRNA
• Sequence: 37 - AAUGGCGUCUCAAGGACCUUGCGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295