Stem-loop prd-mir-5358a

Accession

MI0025588

Description

Panagrellus redivivus prd-mir-5358a precursor miRNA

Sequence

AUGGCGGUGGUCUAAGGGUGUaguguauuuaaagauauaUACCCGUAGUGCCAUCACCACG
.(((.(((((((((.(((((((.(((........)))))))))).))).)))))).)))..

Structure

-A   C      -   A       g   auu 
  UGG GGUGGU CUA GGGUGUa ugu   u
  ||| |||||| ||| ||||||| |||    
  ACC CUACCG GAU CCCAUau aua   a
GC   A      U   G       -   gaa 

Annotation confidence Not enough data

Genome context

KB455232.1: 102789-102849 [+]

Mature prd-miR-5358a-5p

• Accession: MIMAT0030534
• Description: Panagrellus redivivus prd-miR-5358a-5p mature miRNA
• Sequence: 1 - AUGGCGGUGGUCUAAGGGUGU - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-5358a-3p

• Accession: MIMAT0030535
• Description: Panagrellus redivivus prd-miR-5358a-3p mature miRNA
• Sequence: 40 - UACCCGUAGUGCCAUCACCACG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295