Stem-loop prd-mir-7885

Accession

MI0025590

Description

Panagrellus redivivus prd-mir-7885 precursor miRNA

Sequence

AAUAUCUGAAACGUUGGUGUGGcgucaagauacacaauaucgccAAGCCGCCUUUCAGGUAUACC
.((((((((((.((.(((.(((((................))))).))))).))))))))))...

Structure

--A          C  U   G     ucaagau 
   AUAUCUGAAA GU GGU UGGcg       a
   |||||||||| || ||| |||||        
   UAUGGACUUU CG CCG Accgc       c
CCA          C  -   A     uauaaca 

Annotation confidence Low

Genome context

KB455561.1: 321269-321333 [+]

Mature prd-miR-7885-5p

• Accession: MIMAT0030538
• Description: Panagrellus redivivus prd-miR-7885-5p mature miRNA
• Sequence: 1 - AAUAUCUGAAACGUUGGUGUGG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7885-3p

• Accession: MIMAT0030539
• Description: Panagrellus redivivus prd-miR-7885-3p mature miRNA
• Sequence: 45 - AAGCCGCCUUUCAGGUAUACC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295