Stem-loop prd-mir-360

Accession

MI0025591

Description

Panagrellus redivivus prd-mir-360 precursor miRNA

Sequence

UUGUGACCGUUGUAACGGGCauugaauggcauucucuaugCCACUUUGCAACGAGCACAGC
(((((..((((((((.((((((.((((...))))...))))).).))))))))..))))).

Structure

-     AC        C -     --u    g 
 UUGUG  CGUUGUAA G GGCau   gaau  
 |||||  |||||||| | |||||   |||| g
 GACAC  GCAACGUU C CCgua   cuua  
C     GA        U A     ucu    c 

Annotation confidence Not enough data

Genome context

KB455099.1: 161609-161669 [+]

Mature prd-miR-360-5p

• Accession: MIMAT0030540
• Description: Panagrellus redivivus prd-miR-360-5p mature miRNA
• Sequence: 1 - UUGUGACCGUUGUAACGGGC - 20
• Evidence: experimental ; Illumina [1]

Mature prd-miR-360-3p

• Accession: MIMAT0030541
• Description: Panagrellus redivivus prd-miR-360-3p mature miRNA
• Sequence: 41 - CCACUUUGCAACGAGCACAGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295