Stem-loop prd-mir-7873b

Accession

MI0025597

Description

Panagrellus redivivus prd-mir-7873b precursor miRNA

Sequence

CAGCGAUCGGCUUGAGCUUACUgcguaucguuucagUAAUCUCAUGACCGGUCAGCUGA
(((((((((((.((((.((((((.(......).)))))).)))).).)))))).)))).

Structure

-    -      - U    C      c ua 
 CAGC GAUCGG C UGAG UUACUg g  u
 |||| |||||| | |||| |||||| |   
 GUCG CUGGCC G ACUC AAUgac u  c
A    A      A U    U      u ug 

Annotation confidence Not enough data

Genome context

KB455208.1: 122994-123052 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from prd-mir-7873b

Mature prd-miR-7873b-5p

• Accession: MIMAT0030552
• Description: Panagrellus redivivus prd-miR-7873b-5p mature miRNA
• Sequence: 1 - CAGCGAUCGGCUUGAGCUUACU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7873b-3p

• Accession: MIMAT0030553
• Description: Panagrellus redivivus prd-miR-7873b-3p mature miRNA
• Sequence: 37 - UAAUCUCAUGACCGGUCAGCUGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295