Stem-loop prd-mir-7890

Accession

MI0025598

Description

Panagrellus redivivus prd-mir-7890 precursor miRNA

Sequence

UUUGUGUUCGGUGAUCUGACCAGuauagccauauacugauucUGGUCUGGUUGCUGAAAACAAGG
(((((.((((((((((.((((((..(((.......)))...)))))).)))))))))).))))).

Structure

-     G          U      -ua   cc 
 UUUGU UUCGGUGAUC GACCAG   uag  a
 ||||| |||||||||| ||||||   |||  u
 GAACA AAGUCGUUGG CUGGUc   guc  a
G     A          U      uua   au 

Annotation confidence Not enough data

Genome context

KB455449.1: 11710-11774 [-]

Mature prd-miR-7890-5p

• Accession: MIMAT0030554
• Description: Panagrellus redivivus prd-miR-7890-5p mature miRNA
• Sequence: 1 - UUUGUGUUCGGUGAUCUGACCAG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7890-3p

• Accession: MIMAT0030555
• Description: Panagrellus redivivus prd-miR-7890-3p mature miRNA
• Sequence: 43 - UGGUCUGGUUGCUGAAAACAAGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295