Stem-loop prd-mir-5358b

Accession

MI0025607

Description

Panagrellus redivivus prd-mir-5358b precursor miRNA

Sequence

CAGUGUUGGUCAUGCGGGGCGaguguuugauaaucuUACCCGUAGUGCCAUCACCGUU
..(((.((((..((((((..(((.(((....)))))).))))))..)))).)))....

Structure

--CA   U    CA      GC   u   u 
    GUG UGGU  UGCGGG  Gag guu g
    ||| ||||  ||||||  ||| |||  
    CAC ACCG  AUGCCC  Uuc uaa a
UUGC   U    UG      -A   -   u 

Annotation confidence Not enough data

Genome context

KB455130.1: 75029-75086 [-]

Mature prd-miR-5358b-5p

• Accession: MIMAT0030572
• Description: Panagrellus redivivus prd-miR-5358b-5p mature miRNA
• Sequence: 1 - CAGUGUUGGUCAUGCGGGGCG - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-5358b-3p

• Accession: MIMAT0030573
• Description: Panagrellus redivivus prd-miR-5358b-3p mature miRNA
• Sequence: 37 - UACCCGUAGUGCCAUCACCGUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295