Stem-loop prd-mir-7895

Accession

MI0025611

Description

Panagrellus redivivus prd-mir-7895 precursor miRNA

Sequence

UCGCUGUUGGAUGAAUGAAUCGuguuacauuuaauucucgAUUCAUCAACCAACAGCGGC
.(((((((((.(((.(((((((.((((....))))...)))))))))).)))))))))..

Structure

-U         A   A       --u    c 
  CGCUGUUGG UGA UGAAUCG   guua a
  ||||||||| ||| |||||||   ||||  
  GCGACAACC ACU ACUUAgc   uaau u
CG         A   -       ucu    u 

Annotation confidence Not enough data

Genome context

KB455468.1: 46887-46946 [+]

Mature prd-miR-7895-5p

• Accession: MIMAT0030580
• Description: Panagrellus redivivus prd-miR-7895-5p mature miRNA
• Sequence: 1 - UCGCUGUUGGAUGAAUGAAUCG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7895-3p

• Accession: MIMAT0030581
• Description: Panagrellus redivivus prd-miR-7895-3p mature miRNA
• Sequence: 41 - AUUCAUCAACCAACAGCGGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295