Stem-loop prd-mir-7896

Accession

MI0025612

Description

Panagrellus redivivus prd-mir-7896 precursor miRNA

Sequence

GUGAGCCGUACUUGGACUAGUAAaaauuaguuuuuuUACUAAACAUUUAUGGUUCUAG
..((((((((..((...(((((((((......)))))))))..))..))))))))...

Structure

-GU        CU  GAC         uu 
   GAGCCGUA  UG   UAGUAAaaa  a
   ||||||||  ||   |||||||||   
   CUUGGUAU  AC   AUCAUuuuu  g
GAU        UU  -AA         uu 

Annotation confidence Not enough data

Genome context

KB455532.1: 869372-869429 [+]

Mature prd-miR-7896-5p

• Accession: MIMAT0030582
• Description: Panagrellus redivivus prd-miR-7896-5p mature miRNA
• Sequence: 1 - GUGAGCCGUACUUGGACUAGUAA - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7896-3p

• Accession: MIMAT0030583
• Description: Panagrellus redivivus prd-miR-7896-3p mature miRNA
• Sequence: 37 - UACUAAACAUUUAUGGUUCUAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295