Stem-loop prd-mir-7901

Accession

MI0025621

Description

Panagrellus redivivus prd-mir-7901 precursor miRNA

Sequence

GGCGCGUCUUCGGAUUCAGUAUGguuuaugauuuugucacaUACUGUAGUUGAAGCGCGGGG
..((((.((((((...(((((((...((......))...)))))))...))))))))))...

Structure

-GG    U      AUU       guu  ug 
   CGCG CUUCGG   CAGUAUG   ua  a
   |||| ||||||   |||||||   ||   
   GCGC GAAGUU   GUCAUac   gu  u
GGG    -      GAU       acu  uu 

Annotation confidence Not enough data

Genome context

KB455142.1: 287512-287573 [+]

Mature prd-miR-7901-5p

• Accession: MIMAT0030600
• Description: Panagrellus redivivus prd-miR-7901-5p mature miRNA
• Sequence: 1 - GGCGCGUCUUCGGAUUCAGUAUG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7901-3p

• Accession: MIMAT0030601
• Description: Panagrellus redivivus prd-miR-7901-3p mature miRNA
• Sequence: 42 - UACUGUAGUUGAAGCGCGGGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295