Stem-loop prd-mir-7905

Accession

MI0025632

Description

Panagrellus redivivus prd-mir-7905 precursor miRNA

Sequence

ACCGUAACUGAUGCUUUUCAUCgucuuuuucaccgaUGAGAAGGAUCAUUACGUGCA
..(((((.((((.((((((((((..........)))))))))).)))))))))....

Structure

--AC     C    G          ucuu 
    CGUAA UGAU CUUUUCAUCg    u
    ||||| |||| ||||||||||     
    GCAUU ACUA GAAGAGUagc    u
ACGU     -    G          cacu 

Annotation confidence Not enough data

Genome context

KB455323.1: 202753-202809 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from prd-mir-7905

Mature prd-miR-7905-5p

• Accession: MIMAT0030622
• Description: Panagrellus redivivus prd-miR-7905-5p mature miRNA
• Sequence: 1 - ACCGUAACUGAUGCUUUUCAUC - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7905-3p

• Accession: MIMAT0030623
• Description: Panagrellus redivivus prd-miR-7905-3p mature miRNA
• Sequence: 37 - UGAGAAGGAUCAUUACGUGCA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295