Stem-loop prd-mir-7908

Accession

MI0025635

Description

Panagrellus redivivus prd-mir-7908 precursor miRNA

Sequence

AGCAUCACUAUCCUUUGACAAACuguaauuaguaaucaguUAGUCAAGGAGUUGAUUGCUGG
(((((((...(((((.(((.(((((...........))))).))))))))..))).))))..

Structure

--    -   CUA     U   A     uaau 
  AGCA UCA   UCCUU GAC AACug    u
  |||| |||   ||||| ||| |||||    a
  UCGU AGU   AGGAA CUG Uugac    g
GG    U   -UG     -   A     uaau 

Annotation confidence Not enough data

Genome context

KB455208.1: 122837-122898 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from prd-mir-7908

Mature prd-miR-7908-5p

• Accession: MIMAT0030628
• Description: Panagrellus redivivus prd-miR-7908-5p mature miRNA
• Sequence: 1 - AGCAUCACUAUCCUUUGACAAAC - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7908-3p

• Accession: MIMAT0030629
• Description: Panagrellus redivivus prd-miR-7908-3p mature miRNA
• Sequence: 41 - UAGUCAAGGAGUUGAUUGCUGG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295