Stem-loop prd-mir-7909

Accession

MI0025638

Description

Panagrellus redivivus prd-mir-7909 precursor miRNA

Sequence

AGGAAUGUUAUUGCGUCUUCGAUUuguacgauuuaauaaUCCAGAGCAAUAACAAUCCUGU
((((.(((((((((.(((..((((..((.....))..)))).)))))))))))).))))..

Structure

--    A         G   UC    ug  c 
  AGGA UGUUAUUGC UCU  GAUU  ua g
  |||| ||||||||| |||  ||||  || a
  UCCU ACAAUAACG AGA  CUaa  au u
UG    A         -   -C    ua  u 

Annotation confidence Not enough data

Genome context

KB455535.1: 209841-209901 [+]

Mature prd-miR-7909-5p

• Accession: MIMAT0030634
• Description: Panagrellus redivivus prd-miR-7909-5p mature miRNA
• Sequence: 1 - AGGAAUGUUAUUGCGUCUUCGAUU - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7909-3p

• Accession: MIMAT0030635
• Description: Panagrellus redivivus prd-miR-7909-3p mature miRNA
• Sequence: 40 - UCCAGAGCAAUAACAAUCCUGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295