Stem-loop prd-mir-7913

Accession

MI0025648

Description

Panagrellus redivivus prd-mir-7913 precursor miRNA

Sequence

GGCAUUACAUGAGAUAAGCUGUUucucuauuauaauuaaCACUUAUCUUAUGUAAUGAGG
..((((((((((((((((.((((..............))))))))))))))))))))...

Structure

-GG                C    ucucua 
   CAUUACAUGAGAUAAG UGUU      u
   |||||||||||||||| ||||       
   GUAAUGUAUUCUAUUC ACaa      u
GGA                -    uuaaua 

Annotation confidence Not enough data

Genome context

KB455499.1: 53672-53731 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from prd-mir-7913

Mature prd-miR-7913-5p

• Accession: MIMAT0030654
• Description: Panagrellus redivivus prd-miR-7913-5p mature miRNA
• Sequence: 1 - GGCAUUACAUGAGAUAAGCUGUU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7913-3p

• Accession: MIMAT0030655
• Description: Panagrellus redivivus prd-miR-7913-3p mature miRNA
• Sequence: 40 - CACUUAUCUUAUGUAAUGAGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295