Stem-loop prd-mir-87

Accession

MI0025649

Description

Panagrellus redivivus prd-mir-87 precursor miRNA

Sequence

GGCCUGGGACUUGGACUCAACCUgcguaggcucgaaguucgagGUGAGCAAAGUUUCAGGUGUGC
.(((((((((((.(.((((.(((.((..((((...)))))))))))))).)))))))))))....

Structure

---G           G A    A   g  ua    c 
    GCCUGGGACUU G CUCA CCU cg  ggcu  
    ||||||||||| | |||| ||| ||  |||| g
    UGGACUUUGAA C GAGU Gga gc  uuga  
CGUG           A -    -   -  --    a 

Annotation confidence Not enough data

Genome context

KB455127.1: 692615-692679 [+]

Mature prd-miR-87-5p

• Accession: MIMAT0030656
• Description: Panagrellus redivivus prd-miR-87-5p mature miRNA
• Sequence: 1 - GGCCUGGGACUUGGACUCAACCU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-87-3p

• Accession: MIMAT0030657
• Description: Panagrellus redivivus prd-miR-87-3p mature miRNA
• Sequence: 44 - GUGAGCAAAGUUUCAGGUGUGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295