Stem-loop prd-mir-7948c

Accession

MI0025651

Description

Panagrellus redivivus prd-mir-7948c precursor miRNA

Sequence

CAUCGGCCCGAUGUUGCGUUGCUgugcgauuugaaaucagCAAACGCACAUCGGAUCUGUGAU
(((.((.(((((((.(((((((((.............)))).)))))))))))).)).)))..

Structure

--   C  C       U     -    ugcga 
  CAU GG CCGAUGU GCGUU GCUg     u
  ||| || ||||||| ||||| ||||     u
  GUG CU GGCUACA CGCAA Cgac     u
UA   U  A       -     A    uaaag 

Annotation confidence Not enough data

Genome context

Unknown

Mature prd-miR-7948c-5p

• Accession: MIMAT0030660
• Description: Panagrellus redivivus prd-miR-7948c-5p mature miRNA
• Sequence: 1 - CAUCGGCCCGAUGUUGCGUUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7948c-3p

• Accession: MIMAT0030661
• Description: Panagrellus redivivus prd-miR-7948c-3p mature miRNA
• Sequence: 41 - CAAACGCACAUCGGAUCUGUGAU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295