Stem-loop prd-mir-7917

Accession

MI0025656

Description

Panagrellus redivivus prd-mir-7917 precursor miRNA

Sequence

UUGUCCAUGAUAUUCCCUUAACGuguuuuuguaaucgUGAAGGUCAUAUCCCAUGGGCAAG
(((((((((((((..((((.(((.(((.....)))))).))))..)))))..)))))))).

Structure

-        --     UC    A   u   u 
 UUGUCCAU  GAUAU  CCUU ACG guu u
 ||||||||  |||||  |||| ||| ||| u
 AACGGGUA  CUAUA  GGAA Ugc uaa g
G        CC     CU    G   -   u 

Annotation confidence Not enough data

Genome context

KB455561.1: 457323-457383 [+]

Mature prd-miR-7917-5p

• Accession: MIMAT0030670
• Description: Panagrellus redivivus prd-miR-7917-5p mature miRNA
• Sequence: 1 - UUGUCCAUGAUAUUCCCUUAACG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7917-3p

• Accession: MIMAT0030671
• Description: Panagrellus redivivus prd-miR-7917-3p mature miRNA
• Sequence: 38 - UGAAGGUCAUAUCCCAUGGGCAAG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295