Stem-loop prd-mir-7918e

Accession

MI0025658

Description

Panagrellus redivivus prd-mir-7918e precursor miRNA

Sequence

AUUGAGCUCUGAAAUCUUGUUGUgugcaucaaauccAGCAAGUUUCAGAGCUUUUUG
...(((((((((((.(((((((.((.......)).))))))))))))))))))....

Structure

-AUU           U       U  gc 
    GAGCUCUGAAA CUUGUUG gu  a
    ||||||||||| ||||||| ||  u
    UUCGAGACUUU GAACGAc ua  c
GUUU           -       c  aa 

Annotation confidence Not enough data

Genome context

KB455545.1: 517980-518036 [-]

Mature prd-miR-7918e-5p

• Accession: MIMAT0030674
• Description: Panagrellus redivivus prd-miR-7918e-5p mature miRNA
• Sequence: 1 - AUUGAGCUCUGAAAUCUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7918e-3p

• Accession: MIMAT0030675
• Description: Panagrellus redivivus prd-miR-7918e-3p mature miRNA
• Sequence: 37 - AGCAAGUUUCAGAGCUUUUUG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295