Stem-loop prd-mir-7918f

Accession

MI0025659

Description

Panagrellus redivivus prd-mir-7918f precursor miRNA

Sequence

AUUGAGCUCUGAAAUCUUGUUGUgugcuucaaauccgGCAAGUUUCAGAGCUUUUUGA
...(((((((((((.(((((((.((.......)).)))))))))))))))))).....

Structure

--AUU           U       U  gc 
     GAGCUCUGAAA CUUGUUG gu  u
     ||||||||||| ||||||| ||  u
     UUCGAGACUUU GAACGgc ua  c
AGUUU           -       c  aa 

Annotation confidence Not enough data

Genome context

KB455157.1: 168068-168125 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7918f

Mature prd-miR-7918f-5p

• Accession: MIMAT0030676
• Description: Panagrellus redivivus prd-miR-7918f-5p mature miRNA
• Sequence: 1 - AUUGAGCUCUGAAAUCUUGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7918f-3p

• Accession: MIMAT0030677
• Description: Panagrellus redivivus prd-miR-7918f-3p mature miRNA
• Sequence: 38 - GCAAGUUUCAGAGCUUUUUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295