Stem-loop prd-mir-7936

Accession

MI0025686

Description

Panagrellus redivivus prd-mir-7936 precursor miRNA

Sequence

UUACUAGGUUUCCUGCUCGGcauaauugaaucccGUGUAGGAUCUCUAUGUAACU
((((((((..((((((.(((.((......)).))).))))))..)))).))))..

Structure

--    -    UU      U   c  aa 
  UUAC UAGG  UCCUGC CGG au  u
  |||| ||||  |||||| ||| ||   
  AAUG AUCU  AGGAUG Gcc ua  u
UC    U    CU      U   c  ag 

Annotation confidence Not enough data

Genome context

KB455433.1: 160064-160118 [+]

Mature prd-miR-7936-5p

• Accession: MIMAT0030730
• Description: Panagrellus redivivus prd-miR-7936-5p mature miRNA
• Sequence: 1 - UUACUAGGUUUCCUGCUCGG - 20
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7936-3p

• Accession: MIMAT0030731
• Description: Panagrellus redivivus prd-miR-7936-3p mature miRNA
• Sequence: 35 - GUGUAGGAUCUCUAUGUAACU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295