Stem-loop prd-mir-7942

Accession

MI0025693

Description

Panagrellus redivivus prd-mir-7942 precursor miRNA

Sequence

CGCGCGGACAGUCAUCGACUAGuguauucgcauucuAGUCGUUGACUGUCUCUGCGGU
((((.(((((((((.((((((((((....)))..))))))).))))))))).))))..

Structure

--    C         U       --   a 
  CGCG GGACAGUCA CGACUAG  ugu u
  |||| ||||||||| |||||||  |||  
  GCGU UCUGUCAGU GCUGAuc  acg u
UG    C         U       uu   c 

Annotation confidence Not enough data

Genome context

KB455349.1: 150816-150873 [-]

Mature prd-miR-7942-5p

• Accession: MIMAT0030744
• Description: Panagrellus redivivus prd-miR-7942-5p mature miRNA
• Sequence: 1 - CGCGCGGACAGUCAUCGACUAG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7942-3p

• Accession: MIMAT0030745
• Description: Panagrellus redivivus prd-miR-7942-3p mature miRNA
• Sequence: 37 - AGUCGUUGACUGUCUCUGCGGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295