Stem-loop prd-mir-7945

Accession

MI0025696

Description

Panagrellus redivivus prd-mir-7945 precursor miRNA

Sequence

UACUGUAUUUGGUCGUUUAAAGguugcaaguacgcuUCAAAGGACCUUAUACAGGAUG
..((((((..((((.(((.(((((.......)).))).))).))))..))))))....

Structure

--UA      UU    G   A   -  ug 
    CUGUAU  GGUC UUU AAG gu  c
    ||||||  |||| ||| ||| ||  a
    GACAUA  CCAG AAA Uuc ca  a
GUAG      UU    G   C   g  ug 

Annotation confidence Not enough data

Genome context

KB455536.1: 304836-304893 [+]

Mature prd-miR-7945-5p

• Accession: MIMAT0030750
• Description: Panagrellus redivivus prd-miR-7945-5p mature miRNA
• Sequence: 1 - UACUGUAUUUGGUCGUUUAAAG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7945-3p

• Accession: MIMAT0030751
• Description: Panagrellus redivivus prd-miR-7945-3p mature miRNA
• Sequence: 37 - UCAAAGGACCUUAUACAGGAUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295