Stem-loop prd-mir-7939b

Accession

MI0025702

Description

Panagrellus redivivus prd-mir-7939b precursor miRNA

Sequence

CGUGAGCCCUCAUGGCAUUCAUguuaucauucaaaucaUGAAUGUUCUGGAGGCCCGUGGC
((((.(((.(((.((((((((((.............)))))))))).))).))).))))..

Structure

--    A   C   U          uuauc 
  CGUG GCC UCA GGCAUUCAUg     a
  |||| ||| ||| ||||||||||     u
  GUGC CGG GGU UUGUAAGUac     u
CG    C   A   C          uaaac 

Annotation confidence Not enough data

Genome context

KB455489.1: 8060-8120 [-]

Mature prd-miR-7939b-5p

• Accession: MIMAT0030762
• Description: Panagrellus redivivus prd-miR-7939b-5p mature miRNA
• Sequence: 1 - CGUGAGCCCUCAUGGCAUUCAU - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7939b-3p

• Accession: MIMAT0030763
• Description: Panagrellus redivivus prd-miR-7939b-3p mature miRNA
• Sequence: 39 - UGAAUGUUCUGGAGGCCCGUGGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295