Stem-loop prd-mir-5594

Accession

MI0025703

Description

Panagrellus redivivus prd-mir-5594 precursor miRNA

Sequence

AUCAGUUCUUUAGUUCAAAACagaaaaauaucugUUUUGAAAUAAAGAACUGUUUU
..((((((((((.(((((((((((......))))))))))).))))))))))....

Structure

--AU          G           aa 
    CAGUUCUUUA UUCAAAACaga  a
    |||||||||| |||||||||||   
    GUCAAGAAAU AAGUUUUgucu  a
UUUU          A           au 

Annotation confidence Not enough data

Genome context

KB455049.1: 430655-430710 [+]

Mature prd-miR-5594-5p

• Accession: MIMAT0030764
• Description: Panagrellus redivivus prd-miR-5594-5p mature miRNA
• Sequence: 1 - AUCAGUUCUUUAGUUCAAAAC - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-5594-3p

• Accession: MIMAT0030765
• Description: Panagrellus redivivus prd-miR-5594-3p mature miRNA
• Sequence: 35 - UUUUGAAAUAAAGAACUGUUUU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295