Stem-loop prd-mir-7951

Accession

MI0025709

Description

Panagrellus redivivus prd-mir-7951 precursor miRNA

Sequence

CGAUCCCUUUCUGACUUUAACauaguuggucauuugCAAAGACAGGUAAGGGAUUUG
.((((((((((((.((((..((............)).)))).)))).))))))))..

Structure

-C        -    A    AA  uaguu 
  GAUCCCUU UCUG CUUU  Ca     g
  |||||||| |||| ||||  ||      
  UUAGGGAA GGAC GAAA  gu     g
GU        U    A    -C  uuacu 

Annotation confidence Not enough data

Genome context

KB455127.1: 277291-277347 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from prd-mir-7951

Mature prd-miR-7951-5p

• Accession: MIMAT0030774
• Description: Panagrellus redivivus prd-miR-7951-5p mature miRNA
• Sequence: 1 - CGAUCCCUUUCUGACUUUAAC - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7951-3p

• Accession: MIMAT0030775
• Description: Panagrellus redivivus prd-miR-7951-3p mature miRNA
• Sequence: 37 - CAAAGACAGGUAAGGGAUUUG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295