Stem-loop prd-mir-7918d

Accession

MI0025712

Description

Panagrellus redivivus prd-mir-7918d precursor miRNA

Sequence

AUUUGGCUCUAAAAUCUUGCUGugggcauugaaauccAGCAAGUUUCAGAGCUUUUUG
....((((((.(((.(((((((.((.........)))))))))))).)))))).....

Structure

-AUUU      A   U       u  gca 
     GGCUCU AAA CUUGCUG gg   u
     |||||| ||| ||||||| ||   u
     UCGAGA UUU GAACGAc cu   g
GUUUU      C   -       -  aaa 

Annotation confidence Not enough data

Genome context

KB455423.1: 152408-152465 [-]

Mature prd-miR-7918d-5p

• Accession: MIMAT0030780
• Description: Panagrellus redivivus prd-miR-7918d-5p mature miRNA
• Sequence: 1 - AUUUGGCUCUAAAAUCUUGCUG - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7918d-3p

• Accession: MIMAT0030781
• Description: Panagrellus redivivus prd-miR-7918d-3p mature miRNA
• Sequence: 38 - AGCAAGUUUCAGAGCUUUUUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295