Stem-loop prd-mir-7955

Accession

MI0025720

Description

Panagrellus redivivus prd-mir-7955 precursor miRNA

Sequence

AGCGCGUAUGCGGUGACAUCUCgugaaaguuuaaacugaAAUGGCACCUUCAUCCGUGCACU
.(((((.(((.((((.(((.((((..........)).)).))).))))..))).)))))...

Structure

--A     U   -C    A   C  -  gaaa 
   GCGCG AUG  GGUG CAU UC gu    g
   ||||| |||  |||| ||| || ||     
   CGUGC UAC  CCAC GUA ag ca    u
UCA     C   UU    G   A  u  aauu 

Annotation confidence Not enough data

Genome context

KB455424.1: 18608-18669 [+]

Mature prd-miR-7955-5p

• Accession: MIMAT0030796
• Description: Panagrellus redivivus prd-miR-7955-5p mature miRNA
• Sequence: 1 - AGCGCGUAUGCGGUGACAUCUC - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7955-3p

• Accession: MIMAT0030797
• Description: Panagrellus redivivus prd-miR-7955-3p mature miRNA
• Sequence: 40 - AAUGGCACCUUCAUCCGUGCACU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295