Stem-loop prd-mir-7958

Accession

MI0025723

Description

Panagrellus redivivus prd-mir-7958 precursor miRNA

Sequence

CAGAAAGUUAUGGGGUCAAUAUGugcacgaugcauucaUACUGGCCCUUCAAGUUUCUC
.(((((.((..(((((((.((((((((...))))..)))).)))))))..)).))))).

Structure

C     G  AU       A    --    c 
 AGAAA UU  GGGGUCA UAUG  ugca  
 ||||| ||  ||||||| ||||  |||| g
 UCUUU AA  UCCCGGU AUac  acgu  
C     G  CU       C    uu    a 

Annotation confidence Not enough data

Genome context

KB454983.1: 184997-185055 [-]

Mature prd-miR-7958-5p

• Accession: MIMAT0030802
• Description: Panagrellus redivivus prd-miR-7958-5p mature miRNA
• Sequence: 1 - CAGAAAGUUAUGGGGUCAAUAUG - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7958-3p

• Accession: MIMAT0030803
• Description: Panagrellus redivivus prd-miR-7958-3p mature miRNA
• Sequence: 39 - UACUGGCCCUUCAAGUUUCUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295