Stem-loop prd-mir-7959a

Accession

MI0025726

Description

Panagrellus redivivus prd-mir-7959a precursor miRNA

Sequence

CAAAAGUUUAAGUGCAAGCACaaaugaaauaacaacugUCUUUGCACUUAAACUUUUG
((((((((((((((((((.(((..((......))..))).))))))))))))))))))

Structure

                  C   aa  aa 
CAAAAGUUUAAGUGCAAG ACa  ug  a
|||||||||||||||||| |||  ||   
GUUUUCAAAUUCACGUUU Ugu  ac  u
                  C   ca  aa 

Annotation confidence Not enough data

Genome context

KB455130.1: 6501-6558 [+]

Mature prd-miR-7959a-5p

• Accession: MIMAT0030808
• Description: Panagrellus redivivus prd-miR-7959a-5p mature miRNA
• Sequence: 1 - CAAAAGUUUAAGUGCAAGCAC - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7959a-3p

• Accession: MIMAT0030809
• Description: Panagrellus redivivus prd-miR-7959a-3p mature miRNA
• Sequence: 39 - UCUUUGCACUUAAACUUUUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295