Stem-loop prd-mir-7950b

Accession

MI0025730

Description

Panagrellus redivivus prd-mir-7950b precursor miRNA

Sequence

GUUCACCUUUUGCGCCGUUAAuguaaaguucauuguGCCGGCGAAAGAGUUGAACUU
(((((.(((((.(((((.(((((.......)))))...))))).))))).)))))..

Structure

--     C     G     --U     ua 
  GUUCA CUUUU CGCCG   UAAug  a
  ||||| ||||| |||||   |||||  a
  CAAGU GAGAA GCGGC   guuac  g
UU     U     A     CGu     uu 

Annotation confidence Not enough data

Genome context

KB455566.1: 61094-61150 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from prd-mir-7950b

Mature prd-miR-7950b-5p

• Accession: MIMAT0030816
• Description: Panagrellus redivivus prd-miR-7950b-5p mature miRNA
• Sequence: 1 - GUUCACCUUUUGCGCCGUUAA - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7950b-3p

• Accession: MIMAT0030817
• Description: Panagrellus redivivus prd-miR-7950b-3p mature miRNA
• Sequence: 37 - GCCGGCGAAAGAGUUGAACUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295