Stem-loop prd-mir-7965

Accession

MI0025738

Description

Panagrellus redivivus prd-mir-7965 precursor miRNA

Sequence

UGCCGUUUUACAAUGCAAAAAAgaguaguuguucauuUUUUGUAUGCUAAAACAGGCGCU
.(((((((((..(((((((((((((......))).))))))))))..)))))).)))...

Structure

--U   -      CA          -   ua 
   GCC GUUUUA  AUGCAAAAAA gag  g
   ||| ||||||  |||||||||| |||   
   CGG CAAAAU  UAUGUUUUuu cuu  u
UCG   A      CG          a   gu 

Annotation confidence Not enough data

Genome context

KB455519.1: 115245-115304 [+]

Mature prd-miR-7965-5p

• Accession: MIMAT0030830
• Description: Panagrellus redivivus prd-miR-7965-5p mature miRNA
• Sequence: 1 - UGCCGUUUUACAAUGCAAAAAA - 22
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7965-3p

• Accession: MIMAT0030831
• Description: Panagrellus redivivus prd-miR-7965-3p mature miRNA
• Sequence: 38 - UUUUGUAUGCUAAAACAGGCGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295