Stem-loop prd-mir-7969

Accession

MI0025743

Description

Panagrellus redivivus prd-mir-7969 precursor miRNA

Sequence

CUGUGCCCCUUUUCUGUGCCGugauuuguuacucgACAAAGAUAAGGCGGCUCAGCG
(((.(((((((.(((.((.((.(........).)).)).))).)))).))).)))..

Structure

--   U   -    U   G  C  u auu 
  CUG GCC CCUU UCU UG CG g   u
  ||| ||| |||| ||| || || |    
  GAC CGG GGAA AGA AC gc c   g
GC   U   C    U   A  A  u auu 

Annotation confidence Not enough data

Genome context

KB455530.1: 25373-25429 [-]

Mature prd-miR-7969-5p

• Accession: MIMAT0030840
• Description: Panagrellus redivivus prd-miR-7969-5p mature miRNA
• Sequence: 1 - CUGUGCCCCUUUUCUGUGCCG - 21
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7969-3p

• Accession: MIMAT0030841
• Description: Panagrellus redivivus prd-miR-7969-3p mature miRNA
• Sequence: 36 - ACAAAGAUAAGGCGGCUCAGCG - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295