Stem-loop prd-mir-7970

Accession

MI0025744

Description

Panagrellus redivivus prd-mir-7970 precursor miRNA

Sequence

ACAGCAACCUUAAUUCCAACAGCaagauuuugcUUUUGGUCUUAGGGUUCUGUUU
((((.((((((((..((((.(((((....))))).))))..))))))))))))..

Structure

--    C        UU    C     g 
  ACAG AACCUUAA  CCAA AGCaa a
  |||| ||||||||  |||| |||||  
  UGUC UUGGGAUU  GGUU Ucguu u
UU    -        CU    U     u 

Annotation confidence Not enough data

Genome context

KB455573.1: 338366-338420 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from prd-mir-7970

Mature prd-miR-7970-5p

• Accession: MIMAT0030842
• Description: Panagrellus redivivus prd-miR-7970-5p mature miRNA
• Sequence: 1 - ACAGCAACCUUAAUUCCAACAGC - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7970-3p

• Accession: MIMAT0030843
• Description: Panagrellus redivivus prd-miR-7970-3p mature miRNA
• Sequence: 34 - UUUUGGUCUUAGGGUUCUGUUU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295