Stem-loop rgl-MIR7972

Accession

MI0025746

Description

Rehmannia glutinosa rgl-MIR7972 precursor miRNA

Sequence

cugaaucgaaggaaaauuucaagcuugacaaauacgucuuccauggcguccgucccaaaccagucuuccuauauguggaaaggguacacaaaggaagaaaggauacacaaaagacuagcaaaauaguccacaauacucuuuccaccauuuuuaagggagucagucuuauUUGUCAGGCUUGUUAUUCUCCuucgauggcg
....(((((((((.(((..(((((((((((((((((((......))))...........((..(((((((...((((.........)))).)))))))..))..........(((((......)))))......(((((((............)))))))......)))))))))))))))..))).)))))))))....

Structure

cuga         a   uu               ---------------------------------------cgucuuccauggcguccgucccaaa  ag       aua    gaa 
    aucgaagga aau  caagcuugacaaaua                                                                cc  ucuuccu   ugug   a
    ||||||||| |||  |||||||||||||||                                                                ||  |||||||   ||||   g
    uagcuuCCU UUA  GUUCGGACUGUUuau                                                                gg  agaagga   acac   g
gcgg         C   UU               ucugacugagggaauuuuuaccaccuuucucauaacaccugauaaaacgaucagaaaacacaua  aa       --a    aug 

Annotation confidence Not enough data

Genome context

Unknown

Mature rgl-miR7972

• Accession: MIMAT0032261
• Description: Rehmannia glutinosa rgl-miR7972 mature miRNA
• Sequence: 170 - UUGUCAGGCUUGUUAUUCUCC - 190
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23861915
   Transcriptome/degradome-wide identification of R. glutinosa miRNAs and their targets: the role of miRNA activity in the replanting disease
   Li MJ, Yang YH, Chen XJ, Wang FQ, Lin WX, Yi YJ, Zeng L, Yang SY, Zhang ZY
   PLoS One (2013) 8:e68531