miRBase entry: stu-MIR7980a

Stem-loop stu-MIR7980a


Accession
MI0025756
Description
Solanum tuberosum stu-MIR7980a precursor miRNA

Literature search
1 open access papers mention stu-MIR7980a
(2 sentences)

Sequence

uuggacauacgauuuuaucucgugaauugaaaucAUGAGAUGAAGUCAAUGUUUGGAC
((((((((..(((((((((((((((.......))))))))))))))).))))))))..

Structure
--        ac               au 
  uuggacau  gauuuuaucucguga  u
  ||||||||  |||||||||||||||  g
  GGUUUGUA  CUGAAGUAGAGUAcu  a
CA        -A               aa 


Annotation confidence Not enough data
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Genome context
JH138453.1: 161895-161952 [-]

Database links

Mature stu-miR7980a

Accession MIMAT0030847
Description Solanum tuberosum stu-miR7980a mature miRNA
Sequence 35 - AUGAGAUGAAGUCAAUGUUUGGAC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23437348
    Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
    Zhang R, Marshall D, Bryan GJ, Hornyik C
    PLoS One (2013) 8:e57233