Stem-loop stu-MIR7982b

Accession

MI0025759

Description

Solanum tuberosum stu-MIR7982b precursor miRNA

Sequence

2594 reads, 81.0 reads per million, 73 experiments

auauauuaauuaucguuuugauuuauuAAAAGGUGAGAUUCUGAGAUGGGUcaauauuccugguAAGUUGGAUGAUAAUAAUAUAUAU
((((((((.(((((((((.((((((((...(((...(((((......)))))......))))))))))))))))))))))))))))..

Structure

--        a         u        AAA   ---UGA     UG 
  auauauua uuaucguuu gauuuauu   AGG      GAUUC  A
  |||||||| ||||||||| ||||||||   |||      |||||   
  UAUAUAAU AAUAGUAGG UUGAAugg   ucc      cUGGG  G
UA        -         -        ---   uuauaa     UA 

Annotation confidence Low

Genome context

JH138159.1: 422179-422266 [+]

Mature stu-miR7982b-5p

• Accession: MIMAT0058183
• Description: Solanum tuberosum stu-miR7982b-5p mature miRNA
• Sequence: 28 - AAAAGGUGAGAUUCUGAGAUGGGU - 51
• Evidence: experimental ; unknown

Mature stu-miR7982b-3p

• Accession: MIMAT0030850
• Description: Solanum tuberosum stu-miR7982b-3p mature miRNA
• Sequence: 65 - AAGUUGGAUGAUAAUAAUAUAUAU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23437348
   Identification and characterization of miRNA transcriptome in potato by high-throughput sequencing
   Zhang R, Marshall D, Bryan GJ, Hornyik C
   PLoS One (2013) 8:e57233